# .bashrc

# Source global definitions
if [ -f /etc/bashrc ]; then
	. /etc/bashrc
fi

# User specific environment
PATH="$HOME/.local/bin:$HOME/bin:$PATH"
export PATH

# Uncomment the following line if you don't like systemctl's auto-paging feature:
# export SYSTEMD_PAGER=

# User specific aliases and functions
module load gcc
module load slurm 

if [ "$TERM" = "screen" ]; then
    export TERM=xterm
fi
export CLICOLOR=1
export LSCOLORS=ExFxCxDxBxegedabagacad

#--- custom variables here - you shouldn't need to change anything above here ---#
PROMPT="power"          # sets prompt style.  choices: power or anything else to disable
#--- end custom variables, you shouldn't need to change anything below here --#

HOST=$(hostname)        # for host info function

# X DISPLAY settings
XSERVER=$(who am i | awk '{print $NF}' | tr -d ')''(' )
XSERVER=${XSERVER%%:*}
#if [ -z ${DISPLAY:=""} ]; then
#    if [[ -z ${XSERVER}  || ${XSERVER} == $(hostname) || ${XSERVER} == "unix" ]]; then
#        export DISPLAY=":0.0"
#    else
#       export DISPLAY=${XSERVER}:0.0
#    fi
#fi
if [[ ! -z $DISPLAY ]]; then
    if [ $SHLVL = 1 ]; then
        rm -f $HOME/.display
        echo $DISPLAY > $HOME/.display
#        echo "DISPLAY has been set to $DISPLAY"
    elif [ $SHLVL -gt 1 ]; then
        if [ -e $HOME/.display ]; then
            DISPLAY_FIX=$(cat $HOME/.display)
            if [ $DISPLAY != $DISPLAY_FIX ]; then
                export DISPLAY=$DISPLAY_FIX
                echo "screen/DISPLAY mismatch detected.  DISPLAY has been adjusted to $DISPLAY"
            fi
        fi
    fi
fi
export GREP_OPTIONS=--color
alias ls='ls -F --color=tty'
alias ll='ls -alF --color=tty'
alias requestdebug='srun --partition=debug --pty --nodes=1 --ntasks-per-node=1 -t 00:30:00 --wait=0 --export=ALL /bin/bash'
alias matlab='matlab -nodisplay -nosplash '
set -o vi
set -o emacs 
# Bash settings
#umask 077
#ulimit -S -c 0      # Don't want any coredumps
#set -o notify       # notify when jobs running in background terminate
#set -o noclobber    # prevents catting over file
#set -o ignoreeof   # can't c-d out of shell
#set -o nounset      # attempt to use undefined variable outputs error message and forces exit
#set -o xtrace      # useful for debuging

# Enable options:
shopt -s cdspell         # auto fixes cd / spelling mistakes
#shopt -s cdable_vars
#shopt -s checkhash
#shopt -s checkwinsize
#shopt -s cmdhist
#shopt -u mailwarn
#shopt -s sourcepath
#shopt -s no_empty_cmd_completion  # bash>=2.04 only
#shopt -s histappend histreedit histverify
#shopt -s extglob    # necessary for programmable completion

#stty stop undef
#stty start undef


alias pg="ps -ef | grep yhweng"
alias squeue="squeue -u xhu2 --long"
alias ll="ls -l"
alias tail="tail -n 25"

#  Black       0;30     Dark Gray     1;30
#  Blue        0;34     Light Blue    1;34
#  Green       0;32     Light Green   1;32
#  Cyan        0;36     Light Cyan    1;36
#  Red         0;31     Light Red     1;31
#  Purple      0;35     Light Purple  1;35
#  Brown       0;33     Yellow        1;33
#  Light Gray  0;37     White         1;37

red='\e[0;31m'
RED='\e[1;31m'
blue='\e[0;34m'
BLUE='\e[1;34m'
cyan='\e[0;36m'
CYAN='\e[1;36m'
green='\e[0;32m'
GREEN='\e[1;32m'
NC='\e[0m' #no color

    THRESHOLD_LOAD=50
    COLOUR_LOW=$GREEN
    COLOUR_HIGH=$RED

    ONE=$(uptime | sed -e "s/.*load average: \(.*\...\),\(.*\...\),\(.*\...\)/\1/" -e "s/ //g")
    ONEHUNDRED=$(echo -e "scale=0 \n $ONE/0.01 \nquit \n" | bc)
    if [ $ONEHUNDRED -gt $THRESHOLD_LOAD ]
        then
            HOST_COLOR=$COLOUR_HIGH
        else
            HOST_COLOR=$COLOUR_LOW
    fi
    if [ $TERM == "xterm" ]; then
        echo -ne "\033]0;${USER}@${HOSTNAME}: ${PWD}\007"
    fi

#    if [ $PROMPT = "power" ]; then
#        if [ "$UID" -eq 0 ]; then
#            PS1="[\[${HOST_COLOR}\]\t\[${NC}\]][\[${red}\]\u@\h:\w]\$\[${NC}\] "
#        else
#            PS1="[\[${HOST_COLOR}\]\t\[${NC}\]][\[${cyan}\]\u\[${NC}\]@\[${red}\]\h\[${NC}\]:\w]\$ "
##            PS1="\[${cyan}\]\u\[${NC}\]@\[${red}\]\H.tamu.edu\[${NC}\]:\w\$ "
##            PS1="${USER}@${HOSTNAME}:${PWD} "
#        fi
#    else
#        if [ "$UID" -eq 0 ]; then
#            PS1="[\t][\[${red}\]\u@\H:\w]\$\[${NC}\] "
#        else
#            PS1="[\t][\[${cyan}\]\u\[${NC}\]@\[${red}\]\H\[${NC}\]:\w]\$ "
#        fi
#    fi
     PS1="\[${cyan}\]\u\[${NC}\]@\[${red}\]\H\[${NC}\]:\w\$ "

# export PS1="\[${cyan}\]\u\[${NC}\]@\[${red}\]\H.tamu.edu\[${NC}\]:\w\$ "
#export PS1="\[${cyan}\]\u\[${NC}\]@\[${red}\]\H.tamu.edu\[${NC}\]:${PWD##*/home/paul}$ "
#export PS1="\u@"`hostname|sed 's/\([^.]\)\..*/\1:/'`':${PWD##*/home/paul}$ '
#-------------------------------------------------------------------------------------------------
# Set LIB envirement
#export LIB_path=/home/yhweng/.LIB
#
#export NETCDF=/opt/netcdf/4.6.1/intel/mvapich2_ib
#export NETCDF=/opt/netcdf/4.6.1/intel/intelmpi
export NETCDF=/home/xhu2/tools/NetCDF

#export HDF5=/opt/hdf5/1.10.3/intel/intelmpi
#export NETCDF=/share/apps/compute/netcdf/4.3.2/intel/intelmpi  
#export BIN=Linux2_x86pg
#export BIN=Linux2_x86_64pg_gcc_nomp
export BIN=Linux2_x86_64pg_pgcc_nomp
#export BIN=Linux2_x86pg_gcc_nomp
#export GADDIR=$LIB_path/data
#export GASCRP=$LIB_path/lib
#export GEOG_DATAROOT=/home/yhweng/.LIB/GEOG
export NETCDF4=1
export WRF_EM_CORE=1
export NCARG_COLORMAPS=/home/xhu2/tools/ncl_ncarg-6.4.0/lib/ncarg/colormaps
export WRF_NMM_CORE=0 
export EM_CORE=1
#export WRF_CHEM=1
#export WRF_KPP=1
#export SCRIPTS=$EDSS_ROOT/subsys/smokev1/scripts
#export SMKROOT=$EDSS_ROOT/subsys/smokev1
#export SMK_BIN=$SMKROOT/Linux2_x86pgf90
export PATH=.:/home/xhu/tools/vapor/vapor-2.5.0/bin:/usr/local/netcdf-4.0.1/bin:/home/xhu/tools/CDO/cdo-1.6.5/bin:/usr/bin:/home/xhu/tools/p7zip/bin:/home/meteo/xgh5015/tools/byacc/bin:/micromet/s1/xgh5015/Models/WRFV3_chem_forWestSenegal/ARWpost/WRF2VIS5D:/usr/local/hdf/bin:/usr/local/nco/bin::$WRF2GrADS:$WRF2VIS5D:$NCARG_ROOT/bin:$RIP_ROOT:$PATH

export PATH=/home/xhu2/tools/flex/v2.6.4/bin:$PATH
export LD_LIBRARY_PATH=/home/xhu2/tools/flex/v2.6.4/lib:$LD_LIBRARY_PATH
export LD_LIBRARY_PATH="$TACC_NETCDF_DIR/lib:$TACC_HDF5_DIR/lib:$LD_LIBRARY_PATH"
export FLEX_LIB_DIR=/usr/lib64
export FLEX_LIB_DIR=/home/xhu2/tools/flex/v2.6.4/lib
#unset limits
#export MP_STACK_SIZE=64000000
export MP_STACK_SIZE=536870912
#export OMP_NUM_THREADS=2
#export P4_GLOBMEMSIZE=536870912
export P4_GLOBMEMSIZE=1073741824
#export TMPDIR=/home/xhu2


alias gomcip="cd /risk/s0/meteo526/xgh5015/MCIP3/mcip3" 
alias goweb_hfip="cd /wave/s5/www/html"
alias goemission="cd /nsftor/xhu/WRF-UCM/code/3.2.1_goodforEmissionGeneration/WRFV3/test/em_real"
alias goprechem="cd /nsftor/xhu/BeijingO3_MaZhiQiang/global_emissions" 
alias goweb="cd /nsftor/xhu/public_html"
#alias cdw="cd /oasis/projects/nsf/uok114/xhu2"
alias cdw="cd /expanse/lustre/projects/uok114/xhu2"
alias cdw1="cd /nsftor1/xhu/"
alias cdw2="cd /cnproj1/xhu/"
alias box="cd /micromet/s1/xgh5015/1999KWAJEX/BOX_model/BoxRACM_xhu_withBr" 
# List directories in columns
alias pg="ps -ef | grep xhu"
alias tail="tail -n 50"
alias cds="cd /expanse/lustre/scratch/$USER/temp_project"
alias detail="scontrol show job"
#alias show_quota="lfs quota -u $USER /oasis/scratch/comet -h"
alias show_quota="lfs quota -u $USER /expanse/lustre/scratch -h"
alias lfs_quota="lfs quota -u $USER -h"
alias show_quotansf="lfs quota -g uok114 /expanse/lustre/projects/ -h"
alias loadncl="source activate ncl_stable"
export WRFIO_NCD_LARGE_FILE_SUPPORT=1
export MODULEPATH=/share/apps/compute/modulefiles/applications:$MODULEPATH
#module load ncl_ncarg 
module load cpu
module load gcc
module load openmpi
module load netcdf-c
module load ncview
#module unload intel
#module load netcdf
#module load gnutools
#module load intelmpi


# >>> conda initialize >>>
# !! Contents within this block are managed by 'conda init' !!
__conda_setup="$('/home/xhu2/miniconda2/bin/conda' 'shell.bash' 'hook' 2> /dev/null)"
if [ $? -eq 0 ]; then
    eval "$__conda_setup"
else
    if [ -f "/home/xhu2/miniconda2/etc/profile.d/conda.sh" ]; then
        . "/home/xhu2/miniconda2/etc/profile.d/conda.sh"
    else
        export PATH="/home/xhu2/miniconda2/bin:$PATH"
    fi
fi
unset __conda_setup
# <<< conda initialize <<<